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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9538656_9539322_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9538656 - 9539322

Intron Length:

667

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTTGGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

GTTCCTGTAAAT

Flanking Amino Acid:

VPSHGSHEEFAFPDHIADLG

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.8

83.1

28.6

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

67.5

0.39

1.1

33.6

Minor 5ss

33.3

-1.9

3.4

45.9

43.7

Minor BPS

0.14

2.1

75.53

40.8

Associated Gene:

Gene:

EDC4

Ensembl Gene ID:

ENSAPLG00000009238

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019722

9520651 - 9554648

33998

ENSAPLT00000009681

9521651 - 9554648

32998