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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9539415_9539865_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9539415 - 9539865

Intron Length:

451

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

VLIKLFCVHTKALQDVQIRF

Intron Amino Acid Position:

513

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

80.7

33.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

93.8

0.99

0.6

92.5

25.7

Minor 5ss

35.6

-1.6

2.8

42.7

38.3

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

EDC4

Ensembl Gene ID:

ENSAPLG00000009238

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019722

9520651 - 9554648

33998

ENSAPLT00000009681

9521651 - 9554648

32998