Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_9541199_9541627_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9541199 - 9541627

Intron Length:

429

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGTGGC

5'SS Class:

major

3'SS Sequence:

CTGATTGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TGTGACTTACCA

Flanking Amino Acid:

YLILSDVQRKVLYVMELMQN

Intron Amino Acid Position:

429

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

67.1

38.1

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

74.1

0.54

45.5

Minor 5ss

33.4

-1.9

3.5

42.8

Minor BPS

54.2

0.13

1.9

69.03

43.1

Associated Gene:

Gene:

EDC4

Ensembl Gene ID:

ENSAPLG00000009238

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009681

9521651 - 9554648

32998

ENSAPLT00000019722

9520651 - 9554648

33998