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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9541731_9542733_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9541731 - 9542733

Intron Length:

1003

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGGATCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAT

U12 Branch Point Sequence:

CTTTCTGTACCT

Flanking Amino Acid:

TVSWTCLQTICFSPDIFSSM

Intron Amino Acid Position:

394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

77.9

36.8

Major BPS

59.9

0.25

1.3

70.1

Major PPT

67.1

0.38

1.1

58.9

46.4

Minor 5ss

37.4

-1.4

3.6

54.1

45.6

Minor BPS

53.1

0.18

2.3

78.9

Associated Gene:

Gene:

EDC4

Ensembl Gene ID:

ENSAPLG00000009238

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019722

9520651 - 9554648

33998

ENSAPLT00000009681

9521651 - 9554648

32998