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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9545640_9546153_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9545640 - 9546153

Intron Length:

514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCACAT

U12 Branch Point Sequence:

TGTGTATGCACA

Flanking Amino Acid:

QTLALLHEDRAEVWDLDIIR

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

74.9

Major BPS

62.5

0.31

1.2

38.9

Major PPT

85.8

0.8

77.4

41.2

Minor 5ss

31.1

-2.2

3.1

31.2

42.7

Minor BPS

42.6

-0.5

2.1

57.67

41.6

Associated Gene:

Gene:

EDC4

Ensembl Gene ID:

ENSAPLG00000009238

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019722

9520651 - 9554648

33998

ENSAPLT00000009681

9521651 - 9554648

32998