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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9549882_9550996_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9549882 - 9550996

Intron Length:

1115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTAAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

TTTTTCTTAAAA

Flanking Amino Acid:

SLGALQEKQVICLSGDDSST

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

87.3

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

76.4

0.59

79.8

31.2

Minor 5ss

41.1

-1

3.4

62.8

Minor BPS

82.2

1.01

1.2

88.42

27.9

Associated Gene:

Gene:

EDC4

Ensembl Gene ID:

ENSAPLG00000009238

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019722

9520651 - 9554648

33998

ENSAPLT00000009681

9521651 - 9554648

32998