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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9580308_9580355_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9580308 - 9580355

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTCTGTCTT

5'SS Class:

weak_major

3'SS Sequence:

GAGCAGAAAGGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATTTTAAAAACT

Flanking Amino Acid:

RKQFTLKFFLFTMDGPACSK

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.6

0.06

1.4

58.3

46.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

38.3

-0.6

1.6

26.3

35.1

Minor 5ss

43.6

-0.7

2.9

60.1

44.2

Minor BPS

48.5

-0

2.1

76.25

Associated Gene:

Gene:

THAP11

Ensembl Gene ID:

ENSAPLG00000028979

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029372

9580000 - 9589964

9965