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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9580381_9585683_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9580381 - 9585683

Intron Length:

5303

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCGGCGCGG

5'SS Class:

major

3'SS Sequence:

CCAAATCATATAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

TCCCCCCCAAAT

Flanking Amino Acid:

FPLRGVNERKQFTLKFFLFT

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.4

0.36

1.2

47.4

41.3

Major BPS

71.6

0.54

33.1

Major PPT

57.9

0.18

50.5

37.8

Minor 5ss

18.5

-3.6

43.6

Minor BPS

46.2

-0.2

45.5

Associated Gene:

Gene:

THAP11

Ensembl Gene ID:

ENSAPLG00000028979

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029372

9580000 - 9589964

9965