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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9586530_9586606_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9586530 - 9586606

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGCGG

5'SS Class:

major

3'SS Sequence:

TGTGTGTCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAG

U12 Branch Point Sequence:

TGGCACGGATCT

Flanking Amino Acid:

VRRSLGDRPRSGPGSGRNVP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

55.2

Major BPS

58.6

0.21

1.5

57.1

41.8

Major PPT

0.52

69.5

41.6

Minor 5ss

29.7

-2.3

3.2

30.3

42.8

Minor BPS

38.4

-0.8

2.3

56.35

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008854

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046781

9586294 - 9606017

19724

ENSAPLT00000027940

9585647 - 9605749

20103

ENSAPLT00000009210

9586294 - 9605936

19643