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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9586970_9588435_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9586970 - 9588435

Intron Length:

1466

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

CCATTGTTAAAG

Flanking Amino Acid:

SEPASRRTSSMVELQLPDIV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

80.9

31.3

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

78.5

0.64

0.9

77.2

37.1

Minor 5ss

39.4

-1.2

2.7

51.9

37.5

Minor BPS

45.7

-0.4

2.2

48.39

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008854

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046781

9586294 - 9606017

19724

ENSAPLT00000027940

9585647 - 9605749

20103

ENSAPLT00000009210

9586294 - 9605936

19643