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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9592215_9599976_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9592215 - 9599976

Intron Length:

7762

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAGTACT

5'SS Class:

major

3'SS Sequence:

TTTCCTATTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATGAT

U12 Branch Point Sequence:

TATTTCCTATTT

Flanking Amino Acid:

QLSASEEVAGTTEHHTNAGY

Intron Amino Acid Position:

324

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

74.6

35.3

Major BPS

69.5

0.48

1.2

59.7

46.7

Major PPT

83.4

0.75

0.7

82.2

28.1

Minor 5ss

35.1

-1.7

2.8

49.5

40.3

Minor BPS

55.1

0.24

1.9

77.44

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008854

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027940

9585647 - 9605749

20103

ENSAPLT00000009210

9586294 - 9605936

19643