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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9600121_9600600_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9600121 - 9600600

Intron Length:

480

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTAAAAATCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTTTTAAAAAT

Flanking Amino Acid:

SVKHQDTHKAEPEIARSARA

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

0.9

74.8

29.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

67.1

0.38

1.1

46.5

Minor 5ss

27.5

-2.6

2.7

28.2

37.3

Minor BPS

47.3

-0.1

70.29

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008854

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046781

9586294 - 9606017

19724

ENSAPLT00000027940

9585647 - 9605749

20103

ENSAPLT00000009210

9586294 - 9605936

19643