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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9603659_9604481_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9603659 - 9604481

Intron Length:

823

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

CATTCACTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

CCTCCATTCACT

Flanking Amino Acid:

ARDAYQIIEKCCEKYFKQIS

Intron Amino Acid Position:

534

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

68.8

42.2

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

78.4

0.64

0.9

74.3

35.1

Minor 5ss

39.9

-1.1

2.9

41.5

Minor BPS

49.9

0.08

2.1

70.32

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008854

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046781

9586294 - 9606017

19724

ENSAPLT00000027940

9585647 - 9605749

20103

ENSAPLT00000009210

9586294 - 9605936

19643