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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9612404_9612747_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9612404 - 9612747

Intron Length:

344

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGCTGA

5'SS Class:

major

3'SS Sequence:

CAATTTCCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

TTTTCAGTACTA

Flanking Amino Acid:

LIDYKSLFKEDEEGNPEPFV

Intron Amino Acid Position:

600

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

68.7

39.1

Major BPS

76.8

0.67

0.9

75.9

Major PPT

77.4

0.62

0.9

74.1

36.1

Minor 5ss

44.9

-0.5

2.8

55.7

43.1

Minor BPS

48.1

-0.1

2.4

72.1

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008665

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040413

9610572 - 9630377

19806

ENSAPLT00000009017

9610572 - 9629724

19153