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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9612872_9613708_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9612872 - 9613708

Intron Length:

837

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

CATACTGTAACA

Flanking Amino Acid:

NSGSLTSEQFRMALREAFPL

Intron Amino Acid Position:

558

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.9

75.6

36.7

Major BPS

79.7

0.74

79.6

35.6

Major PPT

76.1

0.59

0.9

69.7

35.8

Minor 5ss

19.5

-3.5

3.9

29.7

43.1

Minor BPS

51.5

0.04

2.1

64.85

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008665

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040413

9610572 - 9630377

19806

ENSAPLT00000009017

9610572 - 9629724

19153