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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9616593_9616869_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9616593 - 9616869

Intron Length:

277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCCACCT

5'SS Class:

major

3'SS Sequence:

TTTGCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAG

U12 Branch Point Sequence:

AGCTCAGGAACT

Flanking Amino Acid:

TPRPNWAKCSEVIPGGADRW

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.8

0.3

1.2

56.2

42.8

Major BPS

48.8

-0

1.5

57.1

41.8

Major PPT

86.6

0.82

0.8

81.1

30.9

Minor 5ss

33.6

-1.9

3.4

49.2

46.5

Minor BPS

-0.3

2.3

65.48

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008665

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040413

9610572 - 9630377

19806

ENSAPLT00000009017

9610572 - 9629724

19153