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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9617030_9618436_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9617030 - 9618436

Intron Length:

1407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCATA

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTACTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

AGTTTGTTAAAA

Flanking Amino Acid:

EKKYSDLQQEMETLKKDFDQ

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.8

83.2

30.8

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

70.1

0.45

0.9

67.1

39.2

Minor 5ss

37.5

-1.4

48.1

47.6

Minor BPS

52.7

0.08

2.1

67.49

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008665

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040413

9610572 - 9630377

19806

ENSAPLT00000009017

9610572 - 9629724

19153