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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9618607_9619436_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9618607 - 9619436

Intron Length:

830

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGAAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTGTTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATCAATG

Flanking Amino Acid:

QLNVKQRQVQDVKGEDVVKL

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

74.9

Major BPS

100

1.24

0.5

100

Major PPT

70.2

0.46

1.1

70.2

39.4

Minor 5ss

30.2

-2.3

3.3

38.5

46.8

Minor BPS

62.3

0.25

1.9

73.15

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008665

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040413

9610572 - 9630377

19806

ENSAPLT00000009017

9610572 - 9629724

19153