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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9619573_9620778_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9619573 - 9620778

Intron Length:

1206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTAG

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

TCCTGGTAAATT

Flanking Amino Acid:

KEEKSSLQTQVERLQTSVAE

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.3

33.9

Major BPS

74.2

0.6

0.9

75.7

Major PPT

82.6

0.73

0.8

77.4

31.4

Minor 5ss

38.9

-1.2

2.9

48.7

47.5

Minor BPS

42.7

-0.4

2.5

62.41

48.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008665

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040413

9610572 - 9630377

19806

ENSAPLT00000009017

9610572 - 9629724

19153