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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9620976_9624587_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9620976 - 9624587

Intron Length:

3612

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTTCTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

ATTGTGAGAACC

Flanking Amino Acid:

AIKNEYEATLAHQKETIRAL

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.3

40.1

Major BPS

79.7

0.74

79.6

35.6

Major PPT

78.5

0.64

0.8

77.2

31.6

Minor 5ss

-0.4

2.8

57.8

46.4

Minor BPS

41.8

-0.6

2.3

58.04

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008665

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040413

9610572 - 9630377

19806