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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9627725_9629602_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9627725 - 9629602

Intron Length:

1878

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTAAT

U12 Branch Point Sequence:

TAGAACCTAATC

Flanking Amino Acid:

SVLPKKHKAPSFQLSARGRW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

74.1

32.3

Major BPS

73.1

0.57

71.9

31.3

Major PPT

85.6

0.8

0.6

84.6

23.1

Minor 5ss

35.5

-1.6

2.8

42.4

44.3

Minor BPS

47.8

-0.1

1.9

58.43

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008665

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040413

9610572 - 9630377

19806

ENSAPLT00000009017

9610572 - 9629724

19153