Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_9673017_9680791_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9673017 - 9680791

Intron Length:

7775

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTCTTTTTAATT

Flanking Amino Acid:

CFYTKNGHSLGIAFTDLPSN

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.7

88.4

18.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.2

0.66

0.7

73.1

25.2

Minor 5ss

29.6

-2.3

2.6

32.7

42.2

Minor BPS

72.1

0.77

1.1

79.54

37.3

Associated Gene:

Gene:

RANBP10

Ensembl Gene ID:

ENSAPLG00000010803

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011267

9630506 - 9700442

69937