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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9722177_9722836_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9722177 - 9722836

Intron Length:

660

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAACCCTA

5'SS Class:

weak_major

3'SS Sequence:

CTCCCTTCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCACAA

U12 Branch Point Sequence:

GCATTCACAACC

Flanking Amino Acid:

CPFFLGITSVSPYSPSECCF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.7

0.11

1.3

53.2

45.5

Major BPS

68.5

0.46

75.3

29.8

Major PPT

80.6

0.69

0.7

72.4

32.3

Minor 5ss

49.9

-0

2.9

74.9

Minor BPS

47.9

-0.1

1.8

57.11

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027334

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018506

9705382 - 9723023

17642