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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9753594_9753783_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9753594 - 9753783

Intron Length:

190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTGCCTTCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTCAC

U12 Branch Point Sequence:

CAGACCTCACCG

Flanking Amino Acid:

KFYVIPWPLVLMIFNATATV

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

0.9

75.8

33.3

Major BPS

63.6

0.34

65.3

32.1

Major PPT

76.9

0.61

0.8

69.3

36.9

Minor 5ss

42.3

-0.9

2.5

50.7

40.4

Minor BPS

44.7

-0.5

1.9

45.45

46.4

Associated Gene:

Gene:

PLLP

Ensembl Gene ID:

ENSAPLG00000016886

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032570

9750908 - 9754635

3728