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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9757693_9758891_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9757693 - 9758891

Intron Length:

1199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

CTTATTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TTTCTCTTATTT

Flanking Amino Acid:

FKEMFLDYRAEKEGRSLDLS

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

75.1

40.8

Major BPS

79.1

0.72

69.3

38.4

Major PPT

84.5

0.78

0.7

Minor 5ss

42.3

-0.9

2.9

61.4

42.8

Minor BPS

68.2

0.65

1.5

84.89

35.8

Associated Gene:

Gene:

ARL2BP

Ensembl Gene ID:

ENSAPLG00000012932

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038847

9757543 - 9761016

3474

ENSAPLT00000013455

9757612 - 9760704

3093