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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9767513_9768460_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9767513 - 9768460

Intron Length:

948

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCCTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

CAGGCTTTAACT

Flanking Amino Acid:

ADTELRPCGHSDLCMECALQ

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

0.9

36.4

Major BPS

77.3

0.68

79.3

29.4

Major PPT

81.5

0.71

0.7

74.1

Minor 5ss

-1.9

3.3

47.4

Minor BPS

65.3

0.56

1.5

72.38

44.9

Associated Gene:

Gene:

RSPRY1

Ensembl Gene ID:

ENSAPLG00000012937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013516

9766416 - 9790903

24488

ENSAPLT00000029097

9766416 - 9790903

24488