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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9771070_9772477_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9771070 - 9772477

Intron Length:

1408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

CCTGATCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

TTTTCCTGATCT

Flanking Amino Acid:

PAEKQVFSSAISGFFAAASF

Intron Amino Acid Position:

458

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

83.8

34.5

Major BPS

72.7

0.57

72.1

31.1

Major PPT

76.1

0.59

0.9

68.9

36.8

Minor 5ss

41.8

-0.9

2.8

56.1

41.3

Minor BPS

73.8

0.82

1.7

93.24

34.8

Associated Gene:

Gene:

RSPRY1

Ensembl Gene ID:

ENSAPLG00000012937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029097

9766416 - 9790903

24488

ENSAPLT00000013516

9766416 - 9790903

24488