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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9776538_9777230_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9776538 - 9777230

Intron Length:

693

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTAAATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTGCTTTTAAAT

Flanking Amino Acid:

LIALEKFAQTSENKMTVSES

Intron Amino Acid Position:

256

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

93.7

19.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

81.6

0.71

0.9

75.2

38.3

Minor 5ss

43.4

-0.7

2.9

60.8

37.6

Minor BPS

65.2

0.56

1.4

78.07

38.3

Associated Gene:

Gene:

RSPRY1

Ensembl Gene ID:

ENSAPLG00000012937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029097

9766416 - 9790903

24488

ENSAPLT00000013516

9766416 - 9790903

24488