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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9777298_9778360_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9777298 - 9778360

Intron Length:

1063

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TCCCCATATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TATTTATTAAAT

Flanking Amino Acid:

GILEYLLHSLNFQSHPTVML

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

81.4

30.6

Major BPS

88.7

0.96

0.8

36.5

Major PPT

68.4

0.41

0.9

66.2

33.7

Minor 5ss

37.4

-1.4

3.3

49.4

41.4

Minor BPS

66.5

0.6

1.7

83.74

36.2

Associated Gene:

Gene:

RSPRY1

Ensembl Gene ID:

ENSAPLG00000012937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029097

9766416 - 9790903

24488

ENSAPLT00000013516

9766416 - 9790903

24488