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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9778420_9779827_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9778420 - 9779827

Intron Length:

1408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTGA

5'SS Class:

major

3'SS Sequence:

GGTATTTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

ATAGACTTAATT

Flanking Amino Acid:

VLGCLAEKLAGPASIGLLSP

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

38.3

Major BPS

78.2

0.7

77.9

32.1

Major PPT

79.3

0.66

0.9

72.3

42.5

Minor 5ss

35.4

-1.7

3.3

47.1

48.3

Minor BPS

63.2

0.49

1.6

76.35

40.2

Associated Gene:

Gene:

RSPRY1

Ensembl Gene ID:

ENSAPLG00000012937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029097

9766416 - 9790903

24488

ENSAPLT00000013516

9766416 - 9790903

24488