Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_9779955_9782597_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9779955 - 9782597

Intron Length:

2643

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TTTTCCTGAATA

Flanking Amino Acid:

LLDECPLPTKDALQKLTEIL

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

77.8

33.2

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

96.8

1.05

0.5

96.1

13.2

Minor 5ss

41.3

-1

2.8

49.5

41.2

Minor BPS

81.5

0.99

1.2

88.53

28.1

Associated Gene:

Gene:

RSPRY1

Ensembl Gene ID:

ENSAPLG00000012937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029097

9766416 - 9790903

24488

ENSAPLT00000013516

9766416 - 9790903

24488