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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9782711_9784164_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9782711 - 9784164

Intron Length:

1454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCAAGG

5'SS Class:

major

3'SS Sequence:

TTGTGGTTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TAATTCTAAATG

Flanking Amino Acid:

MITLHEMAETDEGWLEVVQS

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.2

45.6

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

69.3

0.43

1.1

64.5

45.9

Minor 5ss

44.5

-0.6

2.7

58.1

46.1

Minor BPS

57.1

0.08

1.7

60.77

41.5

Associated Gene:

Gene:

RSPRY1

Ensembl Gene ID:

ENSAPLG00000012937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013516

9766416 - 9790903

24488

ENSAPLT00000029097

9766416 - 9790903

24488