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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9784218_9788049_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9784218 - 9788049

Intron Length:

3832

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

ATATCTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TAAATTTTGACC

Flanking Amino Acid:

TLAVIRTLVDNDQEPPYSMI

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

81.6

29.9

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

81.2

0.7

0.8

78.1

35.5

Minor 5ss

38.7

-1.3

2.7

47.6

34.4

Minor BPS

58.4

0.25

1.3

63.35

Associated Gene:

Gene:

RSPRY1

Ensembl Gene ID:

ENSAPLG00000012937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029097

9766416 - 9790903

24488

ENSAPLT00000013516

9766416 - 9790903

24488