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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9790375_9790716_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

9790375 - 9790716

Intron Length:

342

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATACAT

U12 Branch Point Sequence:

GATACCTAAATA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

80.2

30.7

Major BPS

66.1

0.4

31.5

Major PPT

86.6

0.82

0.6

81.5

30.5

Minor 5ss

34.1

-1.8

2.8

40.8

45.4

Minor BPS

58.3

0.26

1.7

66.27

Associated Gene:

Gene:

RSPRY1

Ensembl Gene ID:

ENSAPLG00000012937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029097

9766416 - 9790903

24488