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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9823664_9825061_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9823664 - 9825061

Intron Length:

1398

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCACC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

GTGTTGTGACGT

Flanking Amino Acid:

NFNPTNPFCSGVEGIVQAYS

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

74.9

35.3

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

84.1

0.77

0.8

78.1

30.7

Minor 5ss

35.2

-1.7

2.8

43.7

Minor BPS

38.6

-0.7

2.4

56.42

46.1

Associated Gene:

Gene:

CPNE2

Ensembl Gene ID:

ENSAPLG00000013415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014049

9818207 - 9859334

41128