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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9835840_9836164_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9835840 - 9836164

Intron Length:

325

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGGCT

5'SS Class:

major

3'SS Sequence:

CCTTCTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAC

U12 Branch Point Sequence:

TGCGTCTGAGGC

Flanking Amino Acid:

CDGDVEKLIKVMCYDYDSDG

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

72.4

37.1

Major BPS

82.3

0.8

83.6

25.8

Major PPT

78.5

0.64

0.8

72.5

32.2

Minor 5ss

31.9

-2.1

3.6

48.1

47.5

Minor BPS

41.2

-0.6

1.9

47.01

42.5

Associated Gene:

Gene:

CPNE2

Ensembl Gene ID:

ENSAPLG00000013415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014049

9818207 - 9859334

41128