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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9838231_9842738_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9838231 - 9842738

Intron Length:

4508

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTGCAT

U12 Branch Point Sequence:

CCCTGTGTAACC

Flanking Amino Acid:

SMAGRKLDKKDLFGKSDPFL

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

81.3

32.8

Major BPS

62.7

0.32

1.4

39.9

Major PPT

80.9

0.7

0.8

73.4

37.1

Minor 5ss

-2.4

3.2

40.6

45.6

Minor BPS

44.1

-0.4

2.3

52.59

45.8

Associated Gene:

Gene:

CPNE2

Ensembl Gene ID:

ENSAPLG00000013415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014049

9818207 - 9859334

41128