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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9855602_9859303_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9855602 - 9859303

Intron Length:

3702

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGTGCCAT

5'SS Class:

major

3'SS Sequence:

ACTCCCTCGCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTCCAT

U12 Branch Point Sequence:

TACACCGGGACT

Flanking Amino Acid:

ASHCPGGGTGLGPIGSQYCV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.9

0.35

1.1

59.6

40.7

Major BPS

53.3

0.08

1.4

64.2

Major PPT

0.36

58.3

37.8

Minor 5ss

42.6

-0.8

3.1

44.9

Minor BPS

45.9

-0.2

2.2

65.64

44.7

Associated Gene:

Gene:

CPNE2

Ensembl Gene ID:

ENSAPLG00000013415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014049

9818207 - 9859334

41128