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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9877087_9878139_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9877087 - 9878139

Intron Length:

1053

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTGTG

5'SS Class:

major

3'SS Sequence:

CTGCCCCTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

CTGCCAGTAAGT

Flanking Amino Acid:

LACCKHIEELLLSRNVFGDG

Intron Amino Acid Position:

1645

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

69.5

41.3

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

75.3

0.57

0.8

65.5

36.1

Minor 5ss

39.2

-1.2

3.4

59.1

45.3

Minor BPS

42.6

-0.4

2.4

62.1

47.5

Associated Gene:

Gene:

NLRC5

Ensembl Gene ID:

ENSAPLG00000014412

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015067

9872518 - 9911865

39348

ENSAPLT00000034821

9872122 - 9911865

39744

ENSAPLT00000027619

9872518 - 9911865

39348

ENSAPLT00000027112

9872518 - 9911865

39348