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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9880006_9880631_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9880006 - 9880631

Intron Length:

626

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTTAT

U12 Branch Point Sequence:

CCTGTGTTATTT

Flanking Amino Acid:

LQKCQAIEELSLGHMKLSDA

Intron Amino Acid Position:

1533

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.7

86.6

22.2

Major BPS

63.6

0.34

1.4

57.4

49.1

Major PPT

86.8

0.83

0.7

85.5

29.2

Minor 5ss

30.8

-2.2

3.2

39.9

46.1

Minor BPS

42.9

-0.4

2.2

57.89

46.2

Associated Gene:

Gene:

NLRC5

Ensembl Gene ID:

ENSAPLG00000014412

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027619

9872518 - 9911865

39348

ENSAPLT00000027112

9872518 - 9911865

39348

ENSAPLT00000015067

9872518 - 9911865

39348

ENSAPLT00000034821

9872122 - 9911865

39744