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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9886908_9887887_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9886908 - 9887887

Intron Length:

980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGGCA

5'SS Class:

major

3'SS Sequence:

GTCTCTTGTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

CATGCTTTAACT

Flanking Amino Acid:

TSTHSQKTSCSLTDCAISQG

Intron Amino Acid Position:

1229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.45

1.1

59.7

39.3

Major BPS

77.3

0.68

79.3

29.4

Major PPT

77.2

0.61

0.9

72.4

37.7

Minor 5ss

28.5

-2.5

3.6

39.4

Minor BPS

72.1

0.77

1.4

80.6

41.6

Associated Gene:

Gene:

NLRC5

Ensembl Gene ID:

ENSAPLG00000014412

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034821

9872122 - 9911865

39744

ENSAPLT00000027619

9872518 - 9911865

39348

ENSAPLT00000027112

9872518 - 9911865

39348

ENSAPLT00000015067

9872518 - 9911865

39348