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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9889496_9890398_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9889496 - 9890398

Intron Length:

903

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTATGGTGG

5'SS Class:

major

3'SS Sequence:

TTGTTTGCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

CAGGTTTTGACT

Flanking Amino Acid:

PKHIENGQCFRLRDCTLGPE

Intron Amino Acid Position:

1122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

54.3

45.1

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

83.1

0.74

0.9

81.3

36.4

Minor 5ss

42.7

-0.8

3.1

55.3

48.9

Minor BPS

0.14

1.4

62.22

42.8

Associated Gene:

Gene:

NLRC5

Ensembl Gene ID:

ENSAPLG00000014412

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027112

9872518 - 9911865

39348

ENSAPLT00000015067

9872518 - 9911865

39348

ENSAPLT00000034821

9872122 - 9911865

39744

ENSAPLT00000027619

9872518 - 9911865

39348