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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9896021_9896421_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9896021 - 9896421

Intron Length:

401

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

TTCTTTTTCTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

ATTTCAGTAACC

Flanking Amino Acid:

LPWISISKQLDLSHNLLSIN

Intron Amino Acid Position:

918

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

35.3

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

87.3

0.84

0.6

88.1

21.7

Minor 5ss

39.9

-1.1

3.4

54.7

43.6

Minor BPS

59.2

0.27

2.2

78.19

37.1

Associated Gene:

Gene:

NLRC5

Ensembl Gene ID:

ENSAPLG00000014412

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027619

9872518 - 9911865

39348

ENSAPLT00000027112

9872518 - 9911865

39348

ENSAPLT00000015067

9872518 - 9911865

39348

ENSAPLT00000034821

9872122 - 9911865

39744