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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9896506_9896995_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9896506 - 9896995

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTGTGTATA

5'SS Class:

major

3'SS Sequence:

GAAAATGTCTCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

TCCCCGCTAACT

Flanking Amino Acid:

AMSIVPTVPYFLSGNKLGDE

Intron Amino Acid Position:

942

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.8

0.4

70.5

34.4

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

56.4

0.14

1.1

50.6

47.2

Minor 5ss

42.5

-0.8

2.7

56.3

42.5

Minor BPS

47.7

-0.1

2.4

69.96

46.6

Associated Gene:

Gene:

NLRC5

Ensembl Gene ID:

ENSAPLG00000014412

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027619

9872518 - 9911865

39348