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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9896506_9897453_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9896506 - 9897453

Intron Length:

948

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTGCC

5'SS Class:

major

3'SS Sequence:

GAAAATGTCTCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

TCCCCGCTAACT

Flanking Amino Acid:

LQSCPHLSEVDLSGNKLGDE

Intron Amino Acid Position:

890

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

69.1

37.3

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

56.4

0.14

1.1

50.6

47.2

Minor 5ss

35.2

-1.7

3.2

41.6

38.8

Minor BPS

47.7

-0.1

2.4

69.96

46.6

Associated Gene:

Gene:

NLRC5

Ensembl Gene ID:

ENSAPLG00000014412

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034821

9872122 - 9911865

39744

ENSAPLT00000027112

9872518 - 9911865

39348

ENSAPLT00000015067

9872518 - 9911865

39348