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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9897086_9897453_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9897086 - 9897453

Intron Length:

368

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTGCC

5'SS Class:

major

3'SS Sequence:

TTGTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACAGAT

U12 Branch Point Sequence:

TGTTTTTTTAAG

Flanking Amino Acid:

LQSCPHLSEVELSSSAGRSE

Intron Amino Acid Position:

912

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

69.1

37.3

Major BPS

0.1

50.3

35.4

Major PPT

81.4

0.71

86.9

31.1

Minor 5ss

35.2

-1.7

3.2

41.6

38.8

Minor BPS

50.4

-0.1

1.8

60.53

41.2

Associated Gene:

Gene:

NLRC5

Ensembl Gene ID:

ENSAPLG00000014412

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027619

9872518 - 9911865

39348