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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9902478_9904413_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9902478 - 9904413

Intron Length:

1936

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATGTA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCGTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAC

U12 Branch Point Sequence:

TTGTGCTTACCT

Flanking Amino Acid:

LASCKNVEHLSFRSRRFGDD

Intron Amino Acid Position:

709

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

83.9

27.1

Major BPS

66.4

0.41

1.1

57.4

41.4

Major PPT

82.5

0.73

0.8

81.1

Minor 5ss

35.6

-1.6

3.4

47.2

Minor BPS

62.6

0.47

2.1

83.45

43.9

Associated Gene:

Gene:

NLRC5

Ensembl Gene ID:

ENSAPLG00000014412

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034821

9872122 - 9911865

39744

ENSAPLT00000027619

9872518 - 9911865

39348

ENSAPLT00000027112

9872518 - 9911865

39348

ENSAPLT00000015067

9872518 - 9911865

39348