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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9919348_9919431_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9919348 - 9919431

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTATGACTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

AATTTTATGACT

Flanking Amino Acid:

VFKWAADPSENDQSIRNFLQ

Intron Amino Acid Position:

476

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.3

1.07

0.7

84.4

33.5

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

78.5

0.64

0.9

74.6

40.1

Minor 5ss

36.9

-1.5

51.2

45.2

Minor BPS

0.3

1.6

74.56

35.8

Associated Gene:

Gene:

CETP

Ensembl Gene ID:

ENSAPLG00000014801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015466

9918629 - 9927402

8774