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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9919475_9919579_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9919475 - 9919579

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTACT

5'SS Class:

strong_major

3'SS Sequence:

CCCTCCCCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAACAT

U12 Branch Point Sequence:

TTTTTTTTGCCC

Flanking Amino Acid:

KKLILQPLDSRIEFKVFKWA

Intron Amino Acid Position:

461

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

1.2

84.4

33.5

Major BPS

54.4

0.11

61.4

34.3

Major PPT

76.7

0.6

0.7

25.3

Minor 5ss

33.8

-1.8

2.6

44.2

Minor BPS

47.5

-0.2

3.4

76.51

34.1

Associated Gene:

Gene:

CETP

Ensembl Gene ID:

ENSAPLG00000014801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015466

9918629 - 9927402

8774