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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9921707_9921864_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9921707 - 9921864

Intron Length:

158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACATAC

U12 Branch Point Sequence:

TTTCTTTTAAAG

Flanking Amino Acid:

KANYLESHHKGLVMYKNYSD

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.4

33.3

Major BPS

47.7

-0.1

0.9

42.3

28.6

Major PPT

80.4

0.68

81.8

27.5

Minor 5ss

36.4

-1.5

3.4

49.2

47.3

Minor BPS

65.1

0.33

1.4

69.62

37.6

Associated Gene:

Gene:

CETP

Ensembl Gene ID:

ENSAPLG00000014801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015466

9918629 - 9927402

8774